NEWS

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jenner 0.0.26

• VIMC-2755. Allow dalys life table and parameter objects to be reused for subsequent runs. (For stochastic performance)

jenner 0.0.25

• VIMC-2750. Allow dalys calculation from a data frame, without querying burdens from database

jenner 0.0.24

• VIMC-2492. Expand fix_coverage_fvps to allow specified gavi_support_levels

jenner 0.0.23

• VIMC-2446. Support updated vaultr in jenner

jenner 0.0.22

• VIMC-2382. Updating future projection constrain.

jenner 0.0.21

• Required by VIMC-2255. Constrain Rubella routine total_fvps to be RCV1+RCV2 for 201710gavi/PHE model only; scenarios in later touchstones should have RCV1 and RCV2 evaluated seperately.

jenner 0.0.20

• Required by VIMC-2172. Fixing native impact rates (routine) where there are fvps given, but NA deaths averted, which casued under-estimation of impact rates.

jenner 0.0.19

• Required by VIMC-1892.Allows impact calcualation to include maxium age of interest.

jenner 0.0.18

• VIMC-1976 allow differnt coverage touchstone and population touchstone, so that fix_coverage_fvps function can be flexibly used for interim update

jenner 0.0.17

• VIMC-1758 constrain gavi_support_level to bestminus and gavi, so that fix_coverage_fvps function can be flexibly used for interim update

jenner 0.0.16

• VIMC-1831 ignore touchstone version -42, so that fix_coverage_fvps can be reusable for other touchstones

jenner 0.0.15

• VIMC-1684 impact_method2 sql modification post Wes' touchstone fast forward

jenner 0.0.13

• VIMC-1611 constrain the number of countries for HepB impact calculation - because different scenarios have different number of countries

jenner 0.0.12

• VIMC-1591 add more routine vaccine age
• VIMC-1591 undo the constrain on coverage_old when touchstone_new = touchstone_old
• VIMC-1591 add three columns in the output for method2 impact calculation - population, fvps and coverage

jenner 0.0.11

• VIMC-1380 method 2 impact calculation
• Currently impact calculation is assisted by .csv recipe; this will be changed when recipe is imported montagu
• Both direct impact caculation and method2 (re-allocate impact by fvps * da_rate) are provided

jenner 0.0.10

• Fix bug with insert_values_into where key was given - this probably broke with the RPostgres upgrade (VIMC-1467)

jenner 0.0.9

• (VIMC-1302): Remove the work done for (VIMC-1266). Because of mr_measles migration, no longer need to treat mr_measles as a special case.
• (VIMC-1302): Add a function to generate year of introduction in summary outputs. Avoided touching existing functions. Instead, this function is exported and can be called for reports.

jenner 0.0.8

• (VIMC-1074) re-value Inf/NaN impact_new
• (VIMC-1043) remove references to tr_vaccine in jenner - for relevant reports, can safely remove tr_vaccine.csv from meta/ and orderly.yml
• (VIMC-1266) dealing with the problem of missing sdf7 PSU Measles campaign impact

jenner 0.0.7 (2017-12-14)

• In create_touchstone.R, correct responsibility status from 'approved' to 'incomplete'. 'incompelte' is the default status when a new touchstone is open.

jenner 0.0.6 (2017-11-22)

• create synthetic fvps for situations where - fvps is blank but given coverage

jenner 0.0.5 (2017-11-21)

• start work on touchstone import
• export database_connection

jenner 0.0.4 (2017-11-16)

• correct impact rate and impact rate type in output files
• eliminate warning message caused by updating multiple touchstones in one report
• remove unused codes
• export mu_scale

jenner 0.0.3 (2017-11-09)

• fix suffix in summary_output
• fix migrate coverage.sql to allow 'bestminus' type of activity (SDF6/7)